WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H2.1a.1 Sequence Name  C50H2.1a.1
Length (nt)  3133   Chromosome Location  V: 9889839-9894849
Chromosome . Primary Identifier  V Chromosome Location . Start  9889839
Chromosome Location . End  9894849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008239 fshr-1 C50H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H2.1a C50H2.1a 2790   V: 9889960-9890222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.1a.1 9889839 9894849 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194109   384   V: 9889839-9890222 Caenorhabditis elegans
Exon194111   72   V: 9891278-9891349 Caenorhabditis elegans
Exon194113   150   V: 9891395-9891544 Caenorhabditis elegans
Exon194115   216   V: 9891594-9891809 Caenorhabditis elegans
Exon194117   75   V: 9891857-9891931 Caenorhabditis elegans
Exon194119   169   V: 9891981-9892149 Caenorhabditis elegans
Exon194121   217   V: 9892194-9892410 Caenorhabditis elegans
Exon194123   276   V: 9892611-9892886 Caenorhabditis elegans
Exon194125   181   V: 9892931-9893111 Caenorhabditis elegans
Exon194127   253   V: 9893185-9893437 Caenorhabditis elegans
Exon194129   393   V: 9893483-9893875 Caenorhabditis elegans
Exon194131   357   V: 9893943-9894299 Caenorhabditis elegans
Exon194133   390   V: 9894460-9894849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.1a.1 9889839 9894849 1

1 Sequence

Length
3133

1 Sequence Ontology Term

Identifier Name Description
transcript