WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B5.9a.1 Sequence Name  R07B5.9a.1
Length (nt)  3842   Chromosome Location  V: 9846598-9853741
Chromosome . Primary Identifier  V Chromosome Location . Start  9846598
Chromosome Location . End  9853741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B5.9a R07B5.9a 3741   V: 9846598-9847131

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07B5.9a.1 9846598 9853741 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193834   534   V: 9846598-9847131 Caenorhabditis elegans
Exon193840   738   V: 9847496-9848233 Caenorhabditis elegans
Exon193851   644   V: 9848415-9849058 Caenorhabditis elegans
Exon193862   178   V: 9849645-9849822 Caenorhabditis elegans
Exon193877   174   V: 9850207-9850380 Caenorhabditis elegans
Exon193888   103   V: 9850430-9850532 Caenorhabditis elegans
Exon193903   100   V: 9850726-9850825 Caenorhabditis elegans
Exon193918   398   V: 9850879-9851276 Caenorhabditis elegans
Exon193933   359   V: 9851803-9852161 Caenorhabditis elegans
Exon193948   192   V: 9852310-9852501 Caenorhabditis elegans
Exon193963   186   V: 9852545-9852730 Caenorhabditis elegans
Exon193978   135   V: 9853371-9853505 Caenorhabditis elegans
Exon193989   101   V: 9853641-9853741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07B5.9a.1 9846598 9853741 -1

1 Sequence

Length
3842

1 Sequence Ontology Term

Identifier Name Description
transcript