WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198937 Gene Name  ZK287.14
Sequence Name  ? ZK287.14 Organism  Caenorhabditis elegans
Automated Description  Is affected by ogt-1 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 142
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198937

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK287.14 ZK287.14 142   V: 9685804-9685945
 

Other

0 CDSs

0 RNAi Result

10 Allele

Public Name
gk963301
gk964351
gk962860
gk963365
gk963364
WBVar00213857
gk243863
gk936352
gk712818
gk712817

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00198937 9685804 9685945 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. DESeq2, fold change > 2, FDR < 0.05. WBPaper00066485:ogt-1(ok1474)_upregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00198937 9685804 9685945 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
142

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_9685946..9689685   3740 V: 9685946-9689685 Caenorhabditis elegans