WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06E4.3a.2 Sequence Name  T06E4.3a.2
Length (nt)  7759   Chromosome Location  V: 9634849-9645595
Chromosome . Primary Identifier  V Chromosome Location . Start  9634849
Chromosome Location . End  9645595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06E4.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06E4.3a T06E4.3a 7596   V: 9634980-9635177

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T06E4.3a.2 9634849 9645595 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193223   329   V: 9634849-9635177 Caenorhabditis elegans
Exon193227   681   V: 9635226-9635906 Caenorhabditis elegans
Exon193230   126   V: 9635955-9636080 Caenorhabditis elegans
Exon193233   654   V: 9636339-9636992 Caenorhabditis elegans
Exon193236   1029   V: 9637172-9638200 Caenorhabditis elegans
Exon193239   132   V: 9638249-9638380 Caenorhabditis elegans
Exon193243   534   V: 9638428-9638961 Caenorhabditis elegans
Exon193245   304   V: 9640749-9641052 Caenorhabditis elegans
Exon193247   293   V: 9641101-9641393 Caenorhabditis elegans
Exon193249   211   V: 9641438-9641648 Caenorhabditis elegans
Exon193251   1323   V: 9641698-9643020 Caenorhabditis elegans
Exon193253   1079   V: 9643065-9644143 Caenorhabditis elegans
Exon193255   228   V: 9644191-9644418 Caenorhabditis elegans
Exon193257   483   V: 9644464-9644946 Caenorhabditis elegans
Exon193259   80   V: 9644995-9645074 Caenorhabditis elegans
Exon193261   65   V: 9645119-9645183 Caenorhabditis elegans
Exon193263   102   V: 9645232-9645333 Caenorhabditis elegans
Exon193264   84   V: 9645381-9645464 Caenorhabditis elegans
Exon193266   22   V: 9645574-9645595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T06E4.3a.2 9634849 9645595 -1

1 Sequence

Length
7759

1 Sequence Ontology Term

Identifier Name Description
transcript