WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B3.3a.1 Sequence Name  F25B3.3a.1
Length (nt)  2717   Chromosome Location  V: 9556027-9561671
Chromosome . Primary Identifier  V Chromosome Location . Start  9556027
Chromosome Location . End  9561671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009100 rgef-1 F25B3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B3.3a F25B3.3a 1965   V: 9556716-9556830

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B3.3a.1 9556027 9561671 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193003   804   V: 9556027-9556830 Caenorhabditis elegans
Exon193006   132   V: 9557590-9557721 Caenorhabditis elegans
Exon193007   545   V: 9557993-9558537 Caenorhabditis elegans
Exon193009   259   V: 9558885-9559143 Caenorhabditis elegans
Exon193011   311   V: 9559211-9559521 Caenorhabditis elegans
Exon193013   81   V: 9559776-9559856 Caenorhabditis elegans
Exon193015   93   V: 9559915-9560007 Caenorhabditis elegans
Exon193017   55   V: 9560890-9560944 Caenorhabditis elegans
Exon193019   176   V: 9560994-9561169 Caenorhabditis elegans
Exon193022   116   V: 9561360-9561475 Caenorhabditis elegans
Exon193024   145   V: 9561527-9561671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B3.3a.1 9556027 9561671 -1

1 Sequence

Length
2717

1 Sequence Ontology Term

Identifier Name Description
transcript