Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:F44A2.13 | F44A2.13 |
300
 |
V: 9293333-9293632 |
Other
14 Allele
| Public Name |
|---|
| gk963301 |
| gk964351 |
| gk962860 |
| gk964052 |
| gk963442 |
| gk963441 |
| WBVar00244773 |
| gk675415 |
| gk409551 |
| gk567911 |
| gk910849 |
| gk655433 |
| gk404474 |
| gk243042 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00219947 | 9293333 | 9293632 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_9292166..9293332 | 1167 | V: 9292166-9293332 | Caenorhabditis elegans |
1 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Protein coding genes with decreased expression in prg-1(wm161) comparing to in N2. | Cuffdiff and DEGseq were used to calculate the differential expression of protein-coding genes with and without the prg-1 mutation, and authors selected genes which had more than two-fold difference in expression (P < 0.05, q < 0.01 of Storey) from DEGseq outcomes. The intersection of genes which authors selected from DEGseq outcomes and genes which had more than two-fold difference in expression (P < 0.05) from Cuffdiff outcomes was defined as differentially expressed genes. | WBPaper00045316:prg-1_downregulated_L4 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_9293633..9297157 | 3525 | V: 9293633-9297157 | Caenorhabditis elegans |
