WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E1.4a.1 Sequence Name  F52E1.4a.1
Length (nt)  3138   Chromosome Location  V: 8387356-8391947
Chromosome . Primary Identifier  V Chromosome Location . Start  8387356
Chromosome Location . End  8391947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001534 gcy-7 F52E1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E1.4a F52E1.4a 3138   V: 8387356-8387403

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52E1.4a.1 8387356 8391947 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189841   48   V: 8387356-8387403 Caenorhabditis elegans
Exon189844   191   V: 8387452-8387642 Caenorhabditis elegans
Exon189847   110   V: 8387753-8387862 Caenorhabditis elegans
Exon189850   248   V: 8387938-8388185 Caenorhabditis elegans
Exon189853   112   V: 8388229-8388340 Caenorhabditis elegans
Exon189856   126   V: 8388386-8388511 Caenorhabditis elegans
Exon189859   113   V: 8388555-8388667 Caenorhabditis elegans
Exon189862   120   V: 8388757-8388876 Caenorhabditis elegans
Exon189865   264   V: 8388977-8389240 Caenorhabditis elegans
Exon189868   102   V: 8389293-8389394 Caenorhabditis elegans
Exon189871   180   V: 8389441-8389620 Caenorhabditis elegans
Exon189874   213   V: 8389670-8389882 Caenorhabditis elegans
Exon189877   120   V: 8389930-8390049 Caenorhabditis elegans
Exon189880   57   V: 8390095-8390151 Caenorhabditis elegans
Exon189883   145   V: 8390199-8390343 Caenorhabditis elegans
Exon189886   239   V: 8390527-8390765 Caenorhabditis elegans
Exon189889   236   V: 8390809-8391044 Caenorhabditis elegans
Exon189892   193   V: 8391390-8391582 Caenorhabditis elegans
Exon189897   321   V: 8391627-8391947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52E1.4a.1 8387356 8391947 1

1 Sequence

Length
3138

1 Sequence Ontology Term

Identifier Name Description
transcript