WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D9.2.1 Sequence Name  C16D9.2.1
Length (nt)  7747   Chromosome Location  V: 8228276-8238409
Chromosome . Primary Identifier  V Chromosome Location . Start  8228276
Chromosome Location . End  8238409 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004395 rol-3 C16D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D9.2 C16D9.2 7446   V: 8228519-8228862

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16D9.2.1 8228276 8238409 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189528   587   V: 8228276-8228862 Caenorhabditis elegans
Exon189530   186   V: 8229255-8229440 Caenorhabditis elegans
Exon189531   190   V: 8229489-8229678 Caenorhabditis elegans
Exon189532   448   V: 8229725-8230172 Caenorhabditis elegans
Exon189535   93   V: 8230323-8230415 Caenorhabditis elegans
Exon189536   117   V: 8230460-8230576 Caenorhabditis elegans
Exon189537   199   V: 8230630-8230828 Caenorhabditis elegans
Exon189538   141   V: 8230874-8231014 Caenorhabditis elegans
Exon189539   1859   V: 8231068-8232926 Caenorhabditis elegans
Exon189540   203   V: 8232972-8233174 Caenorhabditis elegans
Exon189541   123   V: 8233231-8233353 Caenorhabditis elegans
Exon189542   119   V: 8233397-8233515 Caenorhabditis elegans
Exon189543   752   V: 8233564-8234315 Caenorhabditis elegans
Exon189544   180   V: 8234363-8234542 Caenorhabditis elegans
Exon189545   167   V: 8234590-8234756 Caenorhabditis elegans
Exon189546   167   V: 8234805-8234971 Caenorhabditis elegans
Exon189547   115   V: 8235017-8235131 Caenorhabditis elegans
Exon189548   256   V: 8235177-8235432 Caenorhabditis elegans
Exon189551   196   V: 8235652-8235847 Caenorhabditis elegans
Exon189552   69   V: 8235895-8235963 Caenorhabditis elegans
Exon189553   104   V: 8236041-8236144 Caenorhabditis elegans
Exon189554   325   V: 8236273-8236597 Caenorhabditis elegans
Exon189555   147   V: 8236643-8236789 Caenorhabditis elegans
Exon189556   190   V: 8236919-8237108 Caenorhabditis elegans
Exon189557   410   V: 8237160-8237569 Caenorhabditis elegans
Exon189558   136   V: 8237613-8237748 Caenorhabditis elegans
Exon189559   75   V: 8238098-8238172 Caenorhabditis elegans
Exon189560   193   V: 8238217-8238409 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16D9.2.1 8228276 8238409 -1

1 Sequence

Length
7747

1 Sequence Ontology Term

Identifier Name Description
transcript