WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12D5.2a.1 Sequence Name  C12D5.2a.1
Length (nt)  1377   Chromosome Location  V: 7686350-7688228
Chromosome . Primary Identifier  V Chromosome Location . Start  7686350
Chromosome Location . End  7688228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015705 nhr-152 C12D5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D5.2a C12D5.2a 1152   V: 7686506-7686547

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C12D5.2a.1 7686350 7688228 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188277   198   V: 7686350-7686547 Caenorhabditis elegans
Exon188280   166   V: 7686725-7686890 Caenorhabditis elegans
Exon188284   281   V: 7686979-7687259 Caenorhabditis elegans
Exon188287   86   V: 7687318-7687403 Caenorhabditis elegans
Exon188290   207   V: 7687451-7687657 Caenorhabditis elegans
Exon188293   107   V: 7687704-7687810 Caenorhabditis elegans
Exon188298   332   V: 7687897-7688228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C12D5.2a.1 7686350 7688228 1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript