WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54F6.13a.1 Sequence Name  C54F6.13a.1
Length (nt)  2082   Chromosome Location  V: 7540890-7544838
Chromosome . Primary Identifier  V Chromosome Location . Start  7540890
Chromosome Location . End  7544838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54F6.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003731 nhx-3 C54F6.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54F6.13a C54F6.13a 2013   V: 7540959-7541123

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.13a.1 7540890 7544838 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187967   234   V: 7540890-7541123 Caenorhabditis elegans
Exon187969   147   V: 7541331-7541477 Caenorhabditis elegans
Exon187972   238   V: 7541526-7541763 Caenorhabditis elegans
Exon187975   579   V: 7541834-7542412 Caenorhabditis elegans
Exon187978   102   V: 7542541-7542642 Caenorhabditis elegans
Exon187981   155   V: 7542691-7542845 Caenorhabditis elegans
Exon187984   290   V: 7542916-7543205 Caenorhabditis elegans
Exon187987   168   V: 7543362-7543529 Caenorhabditis elegans
Exon187990   82   V: 7543655-7543736 Caenorhabditis elegans
Exon187994   87   V: 7544752-7544838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.13a.1 7540890 7544838 -1

1 Sequence

Length
2082

1 Sequence Ontology Term

Identifier Name Description
transcript