WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54F6.8.1 Sequence Name  C54F6.8.1
Length (nt)  1279   Chromosome Location  V: 7511765-7513726
Chromosome . Primary Identifier  V Chromosome Location . Start  7511765
Chromosome Location . End  7513726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54F6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016926 nhr-171 C54F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54F6.8 C54F6.8 1161   V: 7511841-7511933

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.8.1 7511765 7513726 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187907   169   V: 7511765-7511933 Caenorhabditis elegans
Exon187908   111   V: 7512137-7512247 Caenorhabditis elegans
Exon187909   351   V: 7512361-7512711 Caenorhabditis elegans
Exon187910   105   V: 7512933-7513037 Caenorhabditis elegans
Exon187911   253   V: 7513082-7513334 Caenorhabditis elegans
Exon187912   290   V: 7513437-7513726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.8.1 7511765 7513726 1

1 Sequence

Length
1279

1 Sequence Ontology Term

Identifier Name Description
transcript