WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54F6.9.1 Sequence Name  C54F6.9.1
Length (nt)  1049   Chromosome Location  V: 7508994-7510607
Chromosome . Primary Identifier  V Chromosome Location . Start  7508994
Chromosome Location . End  7510607 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54F6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016927 nhr-172 C54F6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54F6.9 C54F6.9 936   V: 7509297-7509626

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.9.1 7508994 7510607 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187898   84   V: 7508994-7509077 Caenorhabditis elegans
Exon187900   354   V: 7509273-7509626 Caenorhabditis elegans
Exon187901   105   V: 7509674-7509778 Caenorhabditis elegans
Exon187903   253   V: 7509861-7510113 Caenorhabditis elegans
Exon187905   253   V: 7510355-7510607 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54F6.9.1 7508994 7510607 1

1 Sequence

Length
1049

1 Sequence Ontology Term

Identifier Name Description
transcript