Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T19F4.6 | T19F4.6 |
396
 |
V: 6879479-6879874 |
Other
14 Allele
| Public Name |
|---|
| gk963301 |
| gk963553 |
| gk964259 |
| gk964351 |
| gk963850 |
| gk964527 |
| gk962860 |
| gk964528 |
| tm12389 |
| gk722963 |
| gk826543 |
| h15635 |
| gk238193 |
| gk238194 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00199451 | 6879479 | 6879874 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_6877393..6879478 | 2086 | V: 6877393-6879478 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that interact with 3xFLAG-DLC-1 as identified by immunoprecipitation followed by RNA sequencing. | DESeq2, fold change > 2,, p-value < 0.01 | WBPaper00055334:DLC-1_interacting | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal | |
| Transcripts that showed significantly decreased expression in lpd-3(ok2138) comparing to in N2 animals. | DESeq2, fold change > 4, FDR < 0.05. | WBPaper00064661:lpd-3(ok2138)_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_6879875..6881114 | 1240 | V: 6879875-6881114 | Caenorhabditis elegans |
