Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T28C12.7 | T28C12.7 |
189
 |
V: 6344979-6345167 |
Other
9 Allele
| Public Name |
|---|
| gk963301 |
| gk963591 |
| gk963553 |
| gk963042 |
| gk963041 |
| gk964259 |
| gk964351 |
| gk963850 |
| gk719841 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00196149 | 6344979 | 6345167 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_6342824..6344978 | 2155 | V: 6342824-6344978 | Caenorhabditis elegans |
1 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Protein coding genes with decreased expression in prg-1(wm161) comparing to in N2. | Cuffdiff and DEGseq were used to calculate the differential expression of protein-coding genes with and without the prg-1 mutation, and authors selected genes which had more than two-fold difference in expression (P < 0.05, q < 0.01 of Storey) from DEGseq outcomes. The intersection of genes which authors selected from DEGseq outcomes and genes which had more than two-fold difference in expression (P < 0.05) from Cuffdiff outcomes was defined as differentially expressed genes. | WBPaper00045316:prg-1_downregulated_L3 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_6345168..6346276 | 1109 | V: 6345168-6346276 | Caenorhabditis elegans |
