WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10F3.5a.1 Sequence Name  C10F3.5a.1
Length (nt)  1366   Chromosome Location  V: 5960200-5963882
Chromosome . Primary Identifier  V Chromosome Location . Start  5960200
Chromosome Location . End  5963882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10F3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003954 pcm-1 C10F3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10F3.5a C10F3.5a 678   V: 5960710-5960817

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.5a.1 5960200 5963882 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182497   618   V: 5960200-5960817 Caenorhabditis elegans
Exon182499   66   V: 5960870-5960935 Caenorhabditis elegans
Exon182502   84   V: 5961827-5961910 Caenorhabditis elegans
Exon182505   123   V: 5962622-5962744 Caenorhabditis elegans
Exon182507   105   V: 5962798-5962902 Caenorhabditis elegans
Exon182509   137   V: 5963083-5963219 Caenorhabditis elegans
Exon182512   233   V: 5963650-5963882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.5a.1 5960200 5963882 -1

1 Sequence

Length
1366

1 Sequence Ontology Term

Identifier Name Description
transcript