WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04E6.11a.1 Sequence Name  C04E6.11a.1
Length (nt)  3203   Chromosome Location  V: 5914093-5917891
Chromosome . Primary Identifier  V Chromosome Location . Start  5914093
Chromosome Location . End  5917891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E6.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015425 lrpr-1 C04E6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04E6.11a C04E6.11a 2988   V: 5914227-5914335

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04E6.11a.1 5914093 5917891 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182343   243   V: 5914093-5914335 Caenorhabditis elegans
Exon182345   127   V: 5914382-5914508 Caenorhabditis elegans
Exon182347   294   V: 5914558-5914851 Caenorhabditis elegans
Exon182349   936   V: 5914898-5915833 Caenorhabditis elegans
Exon182351   119   V: 5915888-5916006 Caenorhabditis elegans
Exon182353   156   V: 5916059-5916214 Caenorhabditis elegans
Exon182355   118   V: 5916266-5916383 Caenorhabditis elegans
Exon182357   385   V: 5916428-5916812 Caenorhabditis elegans
Exon182359   299   V: 5916877-5917175 Caenorhabditis elegans
Exon182361   144   V: 5917229-5917372 Caenorhabditis elegans
Exon182363   121   V: 5917422-5917542 Caenorhabditis elegans
Exon182365   106   V: 5917587-5917692 Caenorhabditis elegans
Exon182368   155   V: 5917737-5917891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04E6.11a.1 5914093 5917891 -1

1 Sequence

Length
3203

1 Sequence Ontology Term

Identifier Name Description
transcript