WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B4.5.1 Sequence Name  F25B4.5.1
Length (nt)  2409   Chromosome Location  V: 5678598-5682630
Chromosome . Primary Identifier  V Chromosome Location . Start  5678598
Chromosome Location . End  5682630 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017768 prp-39 F25B4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B4.5 F25B4.5 2133   V: 5678874-5678956

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25B4.5.1 5678598 5682630 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181881   359   V: 5678598-5678956 Caenorhabditis elegans
Exon181882   80   V: 5679005-5679084 Caenorhabditis elegans
Exon181883   96   V: 5679134-5679229 Caenorhabditis elegans
Exon181884   475   V: 5679282-5679756 Caenorhabditis elegans
Exon181885   529   V: 5680026-5680554 Caenorhabditis elegans
Exon181886   301   V: 5680614-5680914 Caenorhabditis elegans
Exon181887   233   V: 5681195-5681427 Caenorhabditis elegans
Exon181888   196   V: 5681480-5681675 Caenorhabditis elegans
Exon181889   78   V: 5682208-5682285 Caenorhabditis elegans
Exon181890   62   V: 5682569-5682630 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25B4.5.1 5678598 5682630 -1

1 Sequence

Length
2409

1 Sequence Ontology Term

Identifier Name Description
transcript