WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.2.1 Sequence Name  C18C4.2.1
Length (nt)  3881   Chromosome Location  V: 5538800-5545789
Chromosome . Primary Identifier  V Chromosome Location . Start  5538800
Chromosome Location . End  5545789 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000477 cft-1 C18C4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.2 C18C4.2 3744   V: 5538800-5539019

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.2.1 5538800 5545789 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181408   220   V: 5538800-5539019 Caenorhabditis elegans
Exon181409   213   V: 5539068-5539280 Caenorhabditis elegans
Exon181410   74   V: 5539327-5539400 Caenorhabditis elegans
Exon181411   255   V: 5539665-5539919 Caenorhabditis elegans
Exon181412   132   V: 5539968-5540099 Caenorhabditis elegans
Exon181413   72   V: 5540301-5540372 Caenorhabditis elegans
Exon181414   147   V: 5540428-5540574 Caenorhabditis elegans
Exon181415   390   V: 5540627-5541016 Caenorhabditis elegans
Exon181416   75   V: 5541921-5541995 Caenorhabditis elegans
Exon181417   135   V: 5542043-5542177 Caenorhabditis elegans
Exon181418   217   V: 5542228-5542444 Caenorhabditis elegans
Exon181419   306   V: 5542496-5542801 Caenorhabditis elegans
Exon181420   155   V: 5542855-5543009 Caenorhabditis elegans
Exon181421   276   V: 5543484-5543759 Caenorhabditis elegans
Exon181422   120   V: 5543811-5543930 Caenorhabditis elegans
Exon181423   93   V: 5543977-5544069 Caenorhabditis elegans
Exon181424   167   V: 5544154-5544320 Caenorhabditis elegans
Exon181425   235   V: 5544374-5544608 Caenorhabditis elegans
Exon181426   356   V: 5544655-5545010 Caenorhabditis elegans
Exon181427   243   V: 5545547-5545789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.2.1 5538800 5545789 1

1 Sequence

Length
3881

1 Sequence Ontology Term

Identifier Name Description
transcript