WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F3.9a.1 Sequence Name  F08F3.9a.1
Length (nt)  1222   Chromosome Location  V: 5437406-5439168
Chromosome . Primary Identifier  V Chromosome Location . Start  5437406
Chromosome Location . End  5439168 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017265 snpc-1.3 F08F3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F3.9a F08F3.9a 1215   V: 5437406-5437749

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08F3.9a.1 5437406 5439168 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181142   344   V: 5437406-5437749 Caenorhabditis elegans
Exon181144   124   V: 5437802-5437925 Caenorhabditis elegans
Exon181146   273   V: 5438093-5438365 Caenorhabditis elegans
Exon181148   288   V: 5438556-5438843 Caenorhabditis elegans
Exon181150   85   V: 5438914-5438998 Caenorhabditis elegans
Exon181153   108   V: 5439061-5439168 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08F3.9a.1 5437406 5439168 -1

1 Sequence

Length
1222

1 Sequence Ontology Term

Identifier Name Description
transcript