WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09D3.4a.1 Sequence Name  T09D3.4a.1
Length (nt)  1482   Chromosome Location  V: 5354053-5358872
Chromosome . Primary Identifier  V Chromosome Location . Start  5354053
Chromosome Location . End  5358872 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09D3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020385 nhr-216 T09D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09D3.4a T09D3.4a 1473   V: 5354062-5354157

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09D3.4a.1 5354053 5358872 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180957   105   V: 5354053-5354157 Caenorhabditis elegans
Exon180959   152   V: 5354206-5354357 Caenorhabditis elegans
Exon180961   119   V: 5354410-5354528 Caenorhabditis elegans
Exon180963   101   V: 5354776-5354876 Caenorhabditis elegans
Exon180965   96   V: 5354945-5355040 Caenorhabditis elegans
Exon180967   120   V: 5355085-5355204 Caenorhabditis elegans
Exon180969   108   V: 5356044-5356151 Caenorhabditis elegans
Exon180972   290   V: 5356195-5356484 Caenorhabditis elegans
Exon180974   59   V: 5356542-5356600 Caenorhabditis elegans
Exon180976   75   V: 5356694-5356768 Caenorhabditis elegans
Exon180978   101   V: 5357956-5358056 Caenorhabditis elegans
Exon180980   120   V: 5358106-5358225 Caenorhabditis elegans
Exon180982   36   V: 5358837-5358872 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09D3.4a.1 5354053 5358872 -1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript