WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49G5A.1.1 Sequence Name  Y49G5A.1.1
Length (nt)  626   Chromosome Location  V: 5286343-5287373
Chromosome . Primary Identifier  V Chromosome Location . Start  5286343
Chromosome Location . End  5287373 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49G5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021731 Y49G5A.1 Y49G5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49G5A.1 Y49G5A.1 549   V: 5286407-5286649

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y49G5A.1.1 5286343 5287373 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180826   307   V: 5286343-5286649 Caenorhabditis elegans
Exon180827   62   V: 5286693-5286754 Caenorhabditis elegans
Exon180828   112   V: 5286801-5286912 Caenorhabditis elegans
Exon180829   145   V: 5287229-5287373 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y49G5A.1.1 5286343 5287373 -1

1 Sequence

Length
626

1 Sequence Ontology Term

Identifier Name Description
transcript