WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41F3.2.1 Sequence Name  F41F3.2.1
Length (nt)  1358   Chromosome Location  V: 4642952-4646931
Chromosome . Primary Identifier  V Chromosome Location . Start  4642952
Chromosome Location . End  4646931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41F3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004928 soc-1 F41F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41F3.2 F41F3.2 1293   V: 4642970-4643041

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F41F3.2.1 4642952 4646931 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179576   90   V: 4642952-4643041 Caenorhabditis elegans
Exon179577   450   V: 4643596-4644045 Caenorhabditis elegans
Exon179578   97   V: 4645352-4645448 Caenorhabditis elegans
Exon179579   137   V: 4645623-4645759 Caenorhabditis elegans
Exon179580   269   V: 4646245-4646513 Caenorhabditis elegans
Exon179581   64   V: 4646561-4646624 Caenorhabditis elegans
Exon179582   251   V: 4646681-4646931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F41F3.2.1 4642952 4646931 1

1 Sequence

Length
1358

1 Sequence Ontology Term

Identifier Name Description
transcript