WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D11.2.1 Sequence Name  F54D11.2.1
Length (nt)  4392   Chromosome Location  V: 4617938-4628525
Chromosome . Primary Identifier  V Chromosome Location . Start  4617938
Chromosome Location . End  4628525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018812 sumv-2 F54D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D11.2 F54D11.2 3438   V: 4617947-4618005

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54D11.2.1 4617938 4628525 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179553   68   V: 4617938-4618005 Caenorhabditis elegans
Exon179554   778   V: 4618875-4619652 Caenorhabditis elegans
Exon179556   302   V: 4620521-4620822 Caenorhabditis elegans
Exon179558   958   V: 4622060-4623017 Caenorhabditis elegans
Exon179560   522   V: 4623994-4624515 Caenorhabditis elegans
Exon179562   476   V: 4625516-4625991 Caenorhabditis elegans
Exon179564   1288   V: 4627238-4628525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54D11.2.1 4617938 4628525 1

1 Sequence

Length
4392

1 Sequence Ontology Term

Identifier Name Description
transcript