WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H43I07.3a.1 Sequence Name  H43I07.3a.1
Length (nt)  1366   Chromosome Location  V: 4195577-4199399
Chromosome . Primary Identifier  V Chromosome Location . Start  4195577
Chromosome Location . End  4199399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43I07.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019276 algn-5 H43I07.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H43I07.3a H43I07.3a 1020   V: 4195616-4195710

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H43I07.3a.1 4195577 4199399 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178787   134   V: 4195577-4195710 Caenorhabditis elegans
Exon178788   184   V: 4195761-4195944 Caenorhabditis elegans
Exon178789   193   V: 4196011-4196203 Caenorhabditis elegans
Exon178790   172   V: 4197021-4197192 Caenorhabditis elegans
Exon178792   154   V: 4197242-4197395 Caenorhabditis elegans
Exon178794   189   V: 4198225-4198413 Caenorhabditis elegans
Exon178797   340   V: 4199060-4199399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H43I07.3a.1 4195577 4199399 1

1 Sequence

Length
1366

1 Sequence Ontology Term

Identifier Name Description
transcript