WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G5AM.2c.1 Sequence Name  Y45G5AM.2c.1
Length (nt)  3012   Chromosome Location  V: 4176148-4181149
Chromosome . Primary Identifier  V Chromosome Location . Start  4176148
Chromosome Location . End  4181149 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G5AM.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021555 pid-5 Y45G5AM.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G5AM.2c Y45G5AM.2c 3012   V: 4176148-4176202

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y45G5AM.2c.1 4176148 4181149 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178694   55   V: 4176148-4176202 Caenorhabditis elegans
Exon178696   101   V: 4176251-4176351 Caenorhabditis elegans
Exon178699   210   V: 4176413-4176622 Caenorhabditis elegans
Exon178702   531   V: 4176662-4177192 Caenorhabditis elegans
Exon178705   144   V: 4177978-4178121 Caenorhabditis elegans
Exon178710   113   V: 4178169-4178281 Caenorhabditis elegans
Exon178713   139   V: 4178974-4179112 Caenorhabditis elegans
Exon178717   499   V: 4179159-4179657 Caenorhabditis elegans
Exon178721   365   V: 4179725-4180089 Caenorhabditis elegans
Exon178725   140   V: 4180139-4180278 Caenorhabditis elegans
Exon178729   362   V: 4180330-4180691 Caenorhabditis elegans
Exon178733   173   V: 4180745-4180917 Caenorhabditis elegans
Exon178736   180   V: 4180970-4181149 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y45G5AM.2c.1 4176148 4181149 1

1 Sequence

Length
3012

1 Sequence Ontology Term

Identifier Name Description
transcript