WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.1.1 Sequence Name  T05B4.1.1
Length (nt)  1140   Chromosome Location  V: 4135028-4138825
Chromosome . Primary Identifier  V Chromosome Location . Start  4135028
Chromosome Location . End  4138825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020236 lgc-1 T05B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.1 T05B4.1 1116   V: 4135028-4135043

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05B4.1.1 4135028 4138825 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178592   16   V: 4135028-4135043 Caenorhabditis elegans
Exon178593   96   V: 4135120-4135215 Caenorhabditis elegans
Exon178594   92   V: 4135267-4135358 Caenorhabditis elegans
Exon178595   155   V: 4136266-4136420 Caenorhabditis elegans
Exon178596   49   V: 4136472-4136520 Caenorhabditis elegans
Exon178597   66   V: 4136577-4136642 Caenorhabditis elegans
Exon178598   123   V: 4136692-4136814 Caenorhabditis elegans
Exon178599   201   V: 4137557-4137757 Caenorhabditis elegans
Exon178600   94   V: 4137803-4137896 Caenorhabditis elegans
Exon178601   127   V: 4137947-4138073 Caenorhabditis elegans
Exon178602   121   V: 4138705-4138825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05B4.1.1 4135028 4138825 1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
transcript