WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.2.1 Sequence Name  T05B4.2.1
Length (nt)  1559   Chromosome Location  V: 4131889-4135102
Chromosome . Primary Identifier  V Chromosome Location . Start  4131889
Chromosome Location . End  4135102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003647 nhr-57 T05B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.2 T05B4.2 1125   V: 4131937-4132019

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05B4.2.1 4131889 4135102 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178584   131   V: 4131889-4132019 Caenorhabditis elegans
Exon178585   158   V: 4132689-4132846 Caenorhabditis elegans
Exon178586   107   V: 4133204-4133310 Caenorhabditis elegans
Exon178587   105   V: 4133358-4133462 Caenorhabditis elegans
Exon178588   302   V: 4133513-4133814 Caenorhabditis elegans
Exon178589   116   V: 4133869-4133984 Caenorhabditis elegans
Exon178590   155   V: 4134035-4134189 Caenorhabditis elegans
Exon178591   485   V: 4134618-4135102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05B4.2.1 4131889 4135102 1

1 Sequence

Length
1559

1 Sequence Ontology Term

Identifier Name Description
transcript