WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00194988 Gene Name  B0213.21
Sequence Name  ? B0213.21 Organism  Caenorhabditis elegans
Automated Description  Is affected by hmg-3 based on RNA-seq studies. Biotype  SO:0001268
Genetic Position  :± Length (nt)  ? 105
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00194988

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0213.21 B0213.21 105   V: 3956514-3956618
 

Other

0 CDSs

2 RNAi Result

WormBase ID
WBRNAi00038728
WBRNAi00027986

20 Allele

Public Name
gk963301
gk963591
gk963553
gk964259
gk964351
gk963850
gk963027
WBVar02122021
gk964431
gk964379
WBVar02121258
WBVar00091237
WBVar02123284
gk962826
gk962867
gk964442
WBVar00207661
WBVar00207660
WBVar01617308
gk708357

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00194988 3956514 3956618 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in BAT525 [hmg-3 (tm2539) / dpy-5(e61) unc-13(e1091) I.] comparing to in N2 at 1-day post L4 adult hermaphrodite stage. DESeq 2, fold change > 4, adjusted p-value < 0.05. WBPaper00055013:hmg-3(bar24)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00194988 3956514 3956618 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
105

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region