WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08F11.1a.1 Sequence Name  R08F11.1a.1
Length (nt)  2995   Chromosome Location  V: 3777297-3784217
Chromosome . Primary Identifier  V Chromosome Location . Start  3777297
Chromosome Location . End  3784217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08F11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019965 R08F11.1 R08F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08F11.1a R08F11.1a 2460   V: 3777828-3778013

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08F11.1a.1 3777297 3784217 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177874   717   V: 3777297-3778013 Caenorhabditis elegans
Exon177876   91   V: 3779128-3779218 Caenorhabditis elegans
Exon177878   339   V: 3779273-3779611 Caenorhabditis elegans
Exon177880   73   V: 3780030-3780102 Caenorhabditis elegans
Exon177882   201   V: 3780148-3780348 Caenorhabditis elegans
Exon177885   108   V: 3780563-3780670 Caenorhabditis elegans
Exon177886   105   V: 3781221-3781325 Caenorhabditis elegans
Exon177887   302   V: 3781373-3781674 Caenorhabditis elegans
Exon177888   154   V: 3781723-3781876 Caenorhabditis elegans
Exon177889   188   V: 3781929-3782116 Caenorhabditis elegans
Exon177890   484   V: 3782459-3782942 Caenorhabditis elegans
Exon177891   89   V: 3783356-3783444 Caenorhabditis elegans
Exon177892   144   V: 3784074-3784217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08F11.1a.1 3777297 3784217 -1

1 Sequence

Length
2995

1 Sequence Ontology Term

Identifier Name Description
transcript