WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10A.2b.1 Sequence Name  Y39H10A.2b.1
Length (nt)  2229   Chromosome Location  V: 3761139-3766306
Chromosome . Primary Identifier  V Chromosome Location . Start  3761139
Chromosome Location . End  3766306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021479 oac-55 Y39H10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10A.2b Y39H10A.2b 2229   V: 3761139-3761285

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39H10A.2b.1 3761139 3766306 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177803   147   V: 3761139-3761285 Caenorhabditis elegans
Exon177807   202   V: 3761539-3761740 Caenorhabditis elegans
Exon177809   136   V: 3762573-3762708 Caenorhabditis elegans
Exon177810   134   V: 3762759-3762892 Caenorhabditis elegans
Exon177813   94   V: 3762943-3763036 Caenorhabditis elegans
Exon177815   178   V: 3763093-3763270 Caenorhabditis elegans
Exon177817   94   V: 3764204-3764297 Caenorhabditis elegans
Exon177820   371   V: 3764345-3764715 Caenorhabditis elegans
Exon177823   227   V: 3764762-3764988 Caenorhabditis elegans
Exon177826   112   V: 3765351-3765462 Caenorhabditis elegans
Exon177829   116   V: 3765508-3765623 Caenorhabditis elegans
Exon177832   214   V: 3765836-3766049 Caenorhabditis elegans
Exon177834   204   V: 3766103-3766306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39H10A.2b.1 3761139 3766306 1

1 Sequence

Length
2229

1 Sequence Ontology Term

Identifier Name Description
transcript