WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10A.7a.1 Sequence Name  Y39H10A.7a.1
Length (nt)  1683   Chromosome Location  V: 3757153-3759469
Chromosome . Primary Identifier  V Chromosome Location . Start  3757153
Chromosome Location . End  3759469 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10A.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10A.7a Y39H10A.7a 1512   V: 3757318-3757734

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39H10A.7a.1 3757153 3759469 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177793   582   V: 3757153-3757734 Caenorhabditis elegans
Exon177795   163   V: 3757939-3758101 Caenorhabditis elegans
Exon177797   234   V: 3758270-3758503 Caenorhabditis elegans
Exon177799   214   V: 3758701-3758914 Caenorhabditis elegans
Exon177802   490   V: 3758980-3759469 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39H10A.7a.1 3757153 3759469 -1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
transcript