WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00006132 Gene Name  str-70
Sequence Name  ? C50H11.16 Organism  Caenorhabditis elegans
Automated Description  Is affected by resveratrol based on microarray studies. Biotype  SO:0000336
Genetic Position  V :-12.7472 ±0.001651 Length (nt)  ? 1088
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00006132

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

24 Allele

Public Name
gk963301
gk963591
gk963553
gk964259
gk963850
gk963027
gk962689
gk962688
WBVar01972083
gk964478
WBVar02121466
WBVar02124225
WBVar02121253
gk230025
WBVar00583223
gk230024
WBVar01614701
gk375698
WBVar01614702
WBVar01614703
gk449120
gk863502
gk524102
WBVar01986264

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00006132 3095090 3096177 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_3094562..3095089   528 V: 3094562-3095089 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes found to be regulated in daf-16(mgDf50) by resveratrol treatment with p < 0.01. N.A. WBPaper00026929:Resveratrol_regulated_daf-16
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00006132 3095090 3096177 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1088

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_3096178..3097129   952 V: 3096178-3097129 Caenorhabditis elegans