WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E2.3d.1 Sequence Name  F54E2.3d.1
Length (nt)  12990   Chromosome Location  V: 2781984-2800220
Chromosome . Primary Identifier  V Chromosome Location . Start  2781984
Chromosome Location . End  2800220 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E2.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E2.3d F54E2.3d 12396   V: 2782578-2782585

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54E2.3d.1 2781984 2800220 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175425   602   V: 2781984-2782585 Caenorhabditis elegans
Exon175456   748   V: 2783366-2784113 Caenorhabditis elegans
Exon175467   183   V: 2784160-2784342 Caenorhabditis elegans
Exon175485   123   V: 2784836-2784958 Caenorhabditis elegans
Exon175493   7569   V: 2785054-2792622 Caenorhabditis elegans
Exon175504   204   V: 2792670-2792873 Caenorhabditis elegans
Exon175515   195   V: 2792920-2793114 Caenorhabditis elegans
Exon175526   105   V: 2793907-2794011 Caenorhabditis elegans
Exon175537   110   V: 2794054-2794163 Caenorhabditis elegans
Exon175549   247   V: 2795251-2795497 Caenorhabditis elegans
Exon175559   158   V: 2795546-2795703 Caenorhabditis elegans
Exon175570   343   V: 2795751-2796093 Caenorhabditis elegans
Exon175582   992   V: 2797018-2798009 Caenorhabditis elegans
Exon175591   773   V: 2798058-2798830 Caenorhabditis elegans
Exon175600   160   V: 2798883-2799042 Caenorhabditis elegans
Exon175609   439   V: 2799099-2799537 Caenorhabditis elegans
Exon175618   39   V: 2800182-2800220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54E2.3d.1 2781984 2800220 -1

1 Sequence

Length
12990

1 Sequence Ontology Term

Identifier Name Description
transcript