WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B10A.5a.1 Sequence Name  Y40B10A.5a.1
Length (nt)  1085   Chromosome Location  V: 2043240-2046056
Chromosome . Primary Identifier  V Chromosome Location . Start  2043240
Chromosome Location . End  2046056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B10A.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021490 Y40B10A.5 Y40B10A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B10A.5a Y40B10A.5a 951   V: 2043363-2043404

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40B10A.5a.1 2043240 2046056 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173579   165   V: 2043240-2043404 Caenorhabditis elegans
Exon173582   78   V: 2043460-2043537 Caenorhabditis elegans
Exon173586   186   V: 2043700-2043885 Caenorhabditis elegans
Exon173590   129   V: 2043942-2044070 Caenorhabditis elegans
Exon173594   254   V: 2044735-2044988 Caenorhabditis elegans
Exon173598   101   V: 2045039-2045139 Caenorhabditis elegans
Exon173602   104   V: 2045835-2045938 Caenorhabditis elegans
Exon173609   68   V: 2045989-2046056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40B10A.5a.1 2043240 2046056 -1

1 Sequence

Length
1085

1 Sequence Ontology Term

Identifier Name Description
transcript