WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B4.12a.1 Sequence Name  F16B4.12a.1
Length (nt)  1348   Chromosome Location  V: 1619415-1621520
Chromosome . Primary Identifier  V Chromosome Location . Start  1619415
Chromosome Location . End  1621520 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003707 nhr-117 F16B4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B4.12a F16B4.12a 1308   V: 1619452-1619702

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16B4.12a.1 1619415 1621520 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172601   288   V: 1619415-1619702 Caenorhabditis elegans
Exon172604   116   V: 1619744-1619859 Caenorhabditis elegans
Exon172607   95   V: 1619908-1620002 Caenorhabditis elegans
Exon172610   432   V: 1620054-1620485 Caenorhabditis elegans
Exon172614   98   V: 1621009-1621106 Caenorhabditis elegans
Exon172616   140   V: 1621153-1621292 Caenorhabditis elegans
Exon172620   179   V: 1621342-1621520 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16B4.12a.1 1619415 1621520 -1

1 Sequence

Length
1348

1 Sequence Ontology Term

Identifier Name Description
transcript