WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198331 Gene Name  F52F10.8
Sequence Name  ? F52F10.8 Organism  Caenorhabditis elegans
Automated Description  Is affected by eat-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 52
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198331

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52F10.8 F52F10.8 52   V: 1542312-1542363
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk963591
gk963553
gk964259
gk963850
gk963899
gk963027
tm11268

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00198331 1542312 1542363 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1542364..1542441   78 V: 1542364-1542441 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in eat-2(ad465) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:eat-2(ad465)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00198331 1542312 1542363 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
52

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1541887..1542311   425 V: 1541887-1542311 Caenorhabditis elegans