WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C3.9.1 Sequence Name  C38C3.9.1
Length (nt)  1349   Chromosome Location  V: 1509879-1511637
Chromosome . Primary Identifier  V Chromosome Location . Start  1509879
Chromosome Location . End  1511637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016517 nhr-260 C38C3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C3.9 C38C3.9 1197   V: 1510024-1510280

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C38C3.9.1 1509879 1511637 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172323   402   V: 1509879-1510280 Caenorhabditis elegans
Exon172324   113   V: 1510339-1510451 Caenorhabditis elegans
Exon172325   308   V: 1510510-1510817 Caenorhabditis elegans
Exon172326   116   V: 1510875-1510990 Caenorhabditis elegans
Exon172327   141   V: 1511038-1511178 Caenorhabditis elegans
Exon172328   269   V: 1511369-1511637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C38C3.9.1 1509879 1511637 -1

1 Sequence

Length
1349

1 Sequence Ontology Term

Identifier Name Description
transcript