WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12A1.3a.1 Sequence Name  R12A1.3a.1
Length (nt)  1270   Chromosome Location  V: 1422787-1425794
Chromosome . Primary Identifier  V Chromosome Location . Start  1422787
Chromosome Location . End  1425794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12A1.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020017 R12A1.3 R12A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12A1.3a R12A1.3a 816   V: 1423112-1423168

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R12A1.3a.1 1422787 1425794 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172171   382   V: 1422787-1423168 Caenorhabditis elegans
Exon172173   287   V: 1423914-1424200 Caenorhabditis elegans
Exon172176   192   V: 1424250-1424441 Caenorhabditis elegans
Exon172177   107   V: 1425289-1425395 Caenorhabditis elegans
Exon172178   143   V: 1425446-1425588 Caenorhabditis elegans
Exon172179   159   V: 1425636-1425794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R12A1.3a.1 1422787 1425794 -1

1 Sequence

Length
1270

1 Sequence Ontology Term

Identifier Name Description
transcript