WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B3.1a.1 Sequence Name  F16B3.1a.1
Length (nt)  3318   Chromosome Location  V: 1289373-1299332
Chromosome . Primary Identifier  V Chromosome Location . Start  1289373
Chromosome Location . End  1299332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001171 egl-2 F16B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B3.1a F16B3.1a 2871   V: 1289696-1289855

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16B3.1a.1 1289373 1299332 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171987   483   V: 1289373-1289855 Caenorhabditis elegans
Exon171989   338   V: 1290013-1290350 Caenorhabditis elegans
Exon171991   285   V: 1291338-1291622 Caenorhabditis elegans
Exon171993   598   V: 1291666-1292263 Caenorhabditis elegans
Exon171995   175   V: 1292314-1292488 Caenorhabditis elegans
Exon171998   325   V: 1293124-1293448 Caenorhabditis elegans
Exon172000   114   V: 1293495-1293608 Caenorhabditis elegans
Exon172002   124   V: 1293654-1293777 Caenorhabditis elegans
Exon172004   24   V: 1294497-1294520 Caenorhabditis elegans
Exon172006   173   V: 1295244-1295416 Caenorhabditis elegans
Exon172009   116   V: 1297529-1297644 Caenorhabditis elegans
Exon172010   129   V: 1298404-1298532 Caenorhabditis elegans
Exon172012   113   V: 1298578-1298690 Caenorhabditis elegans
Exon172014   118   V: 1298950-1299067 Caenorhabditis elegans
Exon172017   203   V: 1299130-1299332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16B3.1a.1 1289373 1299332 -1

1 Sequence

Length
3318

1 Sequence Ontology Term

Identifier Name Description
transcript