WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39F7.2b.1 Sequence Name  C39F7.2b.1
Length (nt)  2426   Chromosome Location  V: 1223897-1235455
Chromosome . Primary Identifier  V Chromosome Location . Start  1223897
Chromosome Location . End  1235455 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39F7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016539 madd-2 C39F7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39F7.2b C39F7.2b 2256   V: 1224046-1224139

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39F7.2b.1 1223897 1235455 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171905   243   V: 1223897-1224139 Caenorhabditis elegans
Exon171910   100   V: 1224937-1225036 Caenorhabditis elegans
Exon171912   202   V: 1225084-1225285 Caenorhabditis elegans
Exon171914   264   V: 1225642-1225905 Caenorhabditis elegans
Exon171916   146   V: 1225962-1226107 Caenorhabditis elegans
Exon171919   157   V: 1226958-1227114 Caenorhabditis elegans
Exon171921   330   V: 1227352-1227681 Caenorhabditis elegans
Exon171924   60   V: 1233212-1233271 Caenorhabditis elegans
Exon171926   127   V: 1233320-1233446 Caenorhabditis elegans
Exon171928   436   V: 1233762-1234197 Caenorhabditis elegans
Exon171930   108   V: 1234910-1235017 Caenorhabditis elegans
Exon171932   253   V: 1235203-1235455 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39F7.2b.1 1223897 1235455 -1

1 Sequence

Length
2426

1 Sequence Ontology Term

Identifier Name Description
transcript