WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4A.1a.1 Sequence Name  Y50D4A.1a.1
Length (nt)  2558   Chromosome Location  V: 1207889-1219874
Chromosome . Primary Identifier  V Chromosome Location . Start  1207889
Chromosome Location . End  1219874 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021735 Y50D4A.1 Y50D4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4A.1a Y50D4A.1a 2466   V: 1207896-1207973

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4A.1a.1 1207889 1219874 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171874   85   V: 1207889-1207973 Caenorhabditis elegans
Exon171875   91   V: 1208033-1208123 Caenorhabditis elegans
Exon171876   186   V: 1209045-1209230 Caenorhabditis elegans
Exon171878   306   V: 1210317-1210622 Caenorhabditis elegans
Exon171881   373   V: 1212196-1212568 Caenorhabditis elegans
Exon171884   90   V: 1213987-1214076 Caenorhabditis elegans
Exon171888   119   V: 1214828-1214946 Caenorhabditis elegans
Exon171892   107   V: 1215004-1215110 Caenorhabditis elegans
Exon171899   1201   V: 1218674-1219874 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4A.1a.1 1207889 1219874 1

1 Sequence

Length
2558

1 Sequence Ontology Term

Identifier Name Description
transcript