WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00196225 Gene Name  T21H3.6
Sequence Name  ? T21H3.6 Organism  Caenorhabditis elegans
Automated Description  Is affected by pmt-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 146
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00196225

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21H3.6 T21H3.6 146   V: 1164211-1164356
 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk963591
gk963553
gk964259
gk963850
gk963899
gk963027
WBVar01970852
WBVar00580856
gk510325
WBVar01774666
gk876868

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00196225 1164211 1164356 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector. Fold-change > 1.5, ANOVA P values < 0.05. WBPaper00055482:pmt-2(RNAi)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00196225 1164211 1164356 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
146

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1164357..1165127   771 V: 1164357-1165127 Caenorhabditis elegans