WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09A1.2a.1 Sequence Name  R09A1.2a.1
Length (nt)  1648   Chromosome Location  V: 1018336-1023467
Chromosome . Primary Identifier  V Chromosome Location . Start  1018336
Chromosome Location . End  1023467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019972 pei-2 R09A1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09A1.2a R09A1.2a 1146   V: 1018400-1018505

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R09A1.2a.1 1018336 1023467 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171507   170   V: 1018336-1018505 Caenorhabditis elegans
Exon171513   54   V: 1018563-1018616 Caenorhabditis elegans
Exon171520   75   V: 1019397-1019471 Caenorhabditis elegans
Exon171524   56   V: 1019921-1019976 Caenorhabditis elegans
Exon171529   375   V: 1020604-1020978 Caenorhabditis elegans
Exon171531   156   V: 1022098-1022253 Caenorhabditis elegans
Exon171533   262   V: 1022301-1022562 Caenorhabditis elegans
Exon171535   76   V: 1022698-1022773 Caenorhabditis elegans
Exon171537   424   V: 1023044-1023467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R09A1.2a.1 1018336 1023467 -1

1 Sequence

Length
1648

1 Sequence Ontology Term

Identifier Name Description
transcript