WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09A1.1a.1 Sequence Name  R09A1.1a.1
Length (nt)  3655   Chromosome Location  V: 1008803-1018352
Chromosome . Primary Identifier  V Chromosome Location . Start  1008803
Chromosome Location . End  1018352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019971 ergo-1 R09A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09A1.1a R09A1.1a 3366   V: 1008813-1009753

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R09A1.1a.1 1008803 1018352 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171489   951   V: 1008803-1009753 Caenorhabditis elegans
Exon171490   185   V: 1010595-1010779 Caenorhabditis elegans
Exon171491   919   V: 1012120-1013038 Caenorhabditis elegans
Exon171493   275   V: 1014099-1014373 Caenorhabditis elegans
Exon171496   80   V: 1015079-1015158 Caenorhabditis elegans
Exon171499   863   V: 1016368-1017230 Caenorhabditis elegans
Exon171506   382   V: 1017971-1018352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R09A1.1a.1 1008803 1018352 1

1 Sequence

Length
3655

1 Sequence Ontology Term

Identifier Name Description
transcript