WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197318 Gene Name  Y50D4C.8
Sequence Name  ? Y50D4C.8 Organism  Caenorhabditis elegans
Automated Description  Is affected by eat-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 58
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197318

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y50D4C.8 Y50D4C.8 58   V: 970113-970170
 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk963591
gk963553
gk964259
gk963850
gk963027
gk963889
WBVar01774483
gk962552
gk225684
gk962551
gk394965

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197318 970113 970170 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_970171..979902   9732 V: 970171-979902 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in eat-2(ad465) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:eat-2(ad465)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197318 970113 970170 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
58

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_964790..970112   5323 V: 964790-970112 Caenorhabditis elegans