WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4C.4a.1 Sequence Name  Y50D4C.4a.1
Length (nt)  3732   Chromosome Location  V: 950306-964789
Chromosome . Primary Identifier  V Chromosome Location . Start  950306
Chromosome Location . End  964789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4C.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005024 sqv-6 Y50D4C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4C.4a Y50D4C.4a 2421   V: 951605-951878

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4C.4a.1 950306 964789 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171431   1573   V: 950306-951878 Caenorhabditis elegans
Exon171435   185   V: 952909-953093 Caenorhabditis elegans
Exon171437   480   V: 954536-955015 Caenorhabditis elegans
Exon171440   448   V: 956327-956774 Caenorhabditis elegans
Exon171442   412   V: 958605-959016 Caenorhabditis elegans
Exon171443   475   V: 962180-962654 Caenorhabditis elegans
Exon171444   159   V: 964631-964789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4C.4a.1 950306 964789 -1

1 Sequence

Length
3732

1 Sequence Ontology Term

Identifier Name Description
transcript