WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39D8A.1d.1 Sequence Name  Y39D8A.1d.1
Length (nt)  1767   Chromosome Location  V: 419435-421840
Chromosome . Primary Identifier  V Chromosome Location . Start  419435
Chromosome Location . End  421840 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39D8A.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021448 Y39D8A.1 Y39D8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39D8A.1d Y39D8A.1d 1407   V: 419709-419872

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39D8A.1d.1 419435 421840 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169999   438   V: 419435-419872 Caenorhabditis elegans
Exon170004   188   V: 419917-420104 Caenorhabditis elegans
Exon170007   97   V: 420159-420255 Caenorhabditis elegans
Exon170010   132   V: 420380-420511 Caenorhabditis elegans
Exon170013   134   V: 420556-420689 Caenorhabditis elegans
Exon170017   189   V: 420738-420926 Caenorhabditis elegans
Exon170021   172   V: 420996-421167 Caenorhabditis elegans
Exon170025   136   V: 421214-421349 Caenorhabditis elegans
Exon170031   281   V: 421560-421840 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39D8A.1d.1 419435 421840 1

1 Sequence

Length
1767

1 Sequence Ontology Term

Identifier Name Description
transcript