WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y108G3AL.7a.1 Sequence Name  Y108G3AL.7a.1
Length (nt)  5940   Chromosome Location  V: 186169-201297
Chromosome . Primary Identifier  V Chromosome Location . Start  186169
Chromosome Location . End  201297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y108G3AL.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044689 arid-1 Y108G3AL.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.7a Y108G3AL.7a 4938   V: 186305-186307

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y108G3AL.7a.1 186169 201297 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169539   139   V: 186169-186307 Caenorhabditis elegans
Exon169540   108   V: 186367-186474 Caenorhabditis elegans
Exon169542   160   V: 187259-187418 Caenorhabditis elegans
Exon169546   166   V: 188070-188235 Caenorhabditis elegans
Exon169550   1006   V: 189302-190307 Caenorhabditis elegans
Exon169554   328   V: 191282-191609 Caenorhabditis elegans
Exon169558   1060   V: 192686-193745 Caenorhabditis elegans
Exon169564   848   V: 194545-195392 Caenorhabditis elegans
Exon169570   441   V: 196903-197343 Caenorhabditis elegans
Exon169582   732   V: 198926-199657 Caenorhabditis elegans
Exon169594   952   V: 200346-201297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y108G3AL.7a.1 186169 201297 1

1 Sequence

Length
5940

1 Sequence Ontology Term

Identifier Name Description
transcript