WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C9A.2a.1 Sequence Name  Y38C9A.2a.1
Length (nt)  2140   Chromosome Location  V: 118202-122789
Chromosome . Primary Identifier  V Chromosome Location . Start  118202
Chromosome Location . End  122789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C9A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000480 cgp-1 Y38C9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C9A.2a Y38C9A.2a 1842   V: 118463-118590

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C9A.2a.1 118202 122789 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169397   389   V: 118202-118590 Caenorhabditis elegans
Exon169400   193   V: 119065-119257 Caenorhabditis elegans
Exon169404   190   V: 119800-119989 Caenorhabditis elegans
Exon169407   203   V: 120506-120708 Caenorhabditis elegans
Exon169408   121   V: 120750-120870 Caenorhabditis elegans
Exon169409   436   V: 121245-121680 Caenorhabditis elegans
Exon169410   608   V: 122182-122789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C9A.2a.1 118202 122789 -1

1 Sequence

Length
2140

1 Sequence Ontology Term

Identifier Name Description
transcript