WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0348.4v.1 Sequence Name  B0348.4v.1
Length (nt)  4541   Chromosome Location  V: 20825-43572
Chromosome . Primary Identifier  V Chromosome Location . Start  20825
Chromosome Location . End  43572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.4v.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4v B0348.4v 3957   V: 21007-21090

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4v.1 20825 43572 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168836   266   V: 20825-21090 Caenorhabditis elegans
Exon168872   362   V: 22495-22856 Caenorhabditis elegans
Exon168897   136   V: 23159-23294 Caenorhabditis elegans
Exon168935   104   V: 23793-23896 Caenorhabditis elegans
Exon168960   472   V: 24788-25259 Caenorhabditis elegans
Exon168985   165   V: 25965-26129 Caenorhabditis elegans
Exon169010   187   V: 26194-26380 Caenorhabditis elegans
Exon169059   98   V: 30200-30297 Caenorhabditis elegans
Exon169074   243   V: 31340-31582 Caenorhabditis elegans
Exon169097   142   V: 35015-35156 Caenorhabditis elegans
Exon169121   738   V: 36118-36855 Caenorhabditis elegans
Exon169145   296   V: 36918-37213 Caenorhabditis elegans
Exon169169   132   V: 38138-38269 Caenorhabditis elegans
Exon169183   36   V: 38991-39026 Caenorhabditis elegans
Exon169206   270   V: 40454-40723 Caenorhabditis elegans
Exon169230   116   V: 41729-41844 Caenorhabditis elegans
Exon169254   127   V: 42040-42166 Caenorhabditis elegans
Exon169278   104   V: 42214-42317 Caenorhabditis elegans
Exon169290   547   V: 43026-43572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4v.1 20825 43572 1

1 Sequence

Length
4541

1 Sequence Ontology Term

Identifier Name Description
transcript